Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Npc1O35604 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Npc1O35604 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1O35604 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1O35604 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Npc1O35604 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Npc1O35604 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Npc1O35604 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.23■□□□□ 0.51
Npc1O35604 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Npc1O35604 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1O35604 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.23■□□□□ 0.51
Npc1O35604 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1O35604 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.23■□□□□ 0.51
Npc1O35604 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1O35604 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1O35604 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1O35604 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Npc1O35604 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Npc1O35604 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Npc1O35604 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1O35604 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1O35604 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Npc1O35604 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Npc1O35604 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.22■□□□□ 0.51
Npc1O35604 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.22■□□□□ 0.51
Npc1O35604 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1O35604 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1O35604 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Npc1O35604 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.22■□□□□ 0.51
Npc1O35604 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
Npc1O35604 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Npc1O35604 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Npc1O35604 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Npc1O35604 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.21■□□□□ 0.51
Npc1O35604 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.21■□□□□ 0.51
Npc1O35604 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Npc1O35604 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Npc1O35604 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Npc1O35604 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1O35604 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Npc1O35604 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1O35604 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.2■□□□□ 0.5
Npc1O35604 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Npc1O35604 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.2■□□□□ 0.5
Npc1O35604 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.2■□□□□ 0.5
Npc1O35604 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.2■□□□□ 0.5
Npc1O35604 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1O35604 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.2■□□□□ 0.5
Npc1O35604 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1O35604 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1O35604 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1O35604 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Npc1O35604 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.19■□□□□ 0.5
Npc1O35604 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Npc1O35604 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1O35604 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Npc1O35604 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Npc1O35604 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.18■□□□□ 0.5
Npc1O35604 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.18■□□□□ 0.5
Npc1O35604 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.18■□□□□ 0.5
Npc1O35604 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Mir5133-201ENSMUST00000174955 77 ntBASIC18.18■□□□□ 0.5
Npc1O35604 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.18■□□□□ 0.5
Npc1O35604 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Npc1O35604 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1O35604 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1O35604 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms