Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.73■□□□□ 0.43
Abca4O35600 Gm5587-201ENSMUST00000206270 674 ntBASIC17.73■□□□□ 0.43
Abca4O35600 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Abca4O35600 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Abca4O35600 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Abca4O35600 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.72■□□□□ 0.43
Abca4O35600 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.72■□□□□ 0.43
Abca4O35600 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.72■□□□□ 0.43
Abca4O35600 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Abca4O35600 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.72■□□□□ 0.43
Abca4O35600 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Abca4O35600 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Abca4O35600 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.71■□□□□ 0.43
Abca4O35600 Mtag2-201ENSMUST00000058665 714 ntBASIC17.71■□□□□ 0.43
Abca4O35600 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abca4O35600 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Abca4O35600 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Abca4O35600 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Abca4O35600 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca4O35600 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca4O35600 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Abca4O35600 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca4O35600 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.7■□□□□ 0.42
Abca4O35600 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca4O35600 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.7■□□□□ 0.42
Abca4O35600 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Abca4O35600 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Abca4O35600 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.7■□□□□ 0.42
Abca4O35600 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca4O35600 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abca4O35600 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Abca4O35600 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abca4O35600 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Abca4O35600 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Abca4O35600 AW822252-206ENSMUST00000208904 237 ntBASIC17.69■□□□□ 0.42
Abca4O35600 Gm18669-201ENSMUST00000216049 778 ntBASIC17.69■□□□□ 0.42
Abca4O35600 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abca4O35600 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Abca4O35600 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abca4O35600 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Abca4O35600 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Abca4O35600 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.69■□□□□ 0.42
Abca4O35600 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abca4O35600 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abca4O35600 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Abca4O35600 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Abca4O35600 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Abca4O35600 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.68■□□□□ 0.42
Abca4O35600 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.68■□□□□ 0.42
Abca4O35600 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abca4O35600 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Abca4O35600 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca4O35600 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.67■□□□□ 0.42
Abca4O35600 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca4O35600 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.67■□□□□ 0.42
Abca4O35600 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Abca4O35600 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca4O35600 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Abca4O35600 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca4O35600 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Abca4O35600 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.67■□□□□ 0.42
Abca4O35600 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Abca4O35600 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.67■□□□□ 0.42
Abca4O35600 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca4O35600 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Abca4O35600 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.66■□□□□ 0.42
Abca4O35600 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca4O35600 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca4O35600 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca4O35600 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Abca4O35600 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms