Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptch2O35595 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.22■□□□□ 0.67
Ptch2O35595 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.22■□□□□ 0.67
Ptch2O35595 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptch2O35595 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ptch2O35595 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.22■□□□□ 0.67
Ptch2O35595 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ptch2O35595 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ptch2O35595 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.21■□□□□ 0.67
Ptch2O35595 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.21■□□□□ 0.67
Ptch2O35595 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ptch2O35595 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ptch2O35595 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ptch2O35595 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Ptch2O35595 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptch2O35595 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.2■□□□□ 0.66
Ptch2O35595 Gm12896-201ENSMUST00000118430 226 ntBASIC19.2■□□□□ 0.66
Ptch2O35595 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.2■□□□□ 0.66
Ptch2O35595 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.2■□□□□ 0.66
Ptch2O35595 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptch2O35595 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptch2O35595 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ptch2O35595 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ptch2O35595 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Ptch2O35595 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ptch2O35595 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ptch2O35595 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ptch2O35595 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ptch2O35595 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ptch2O35595 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ptch2O35595 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.17■□□□□ 0.66
Ptch2O35595 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ptch2O35595 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
Ptch2O35595 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.16■□□□□ 0.66
Ptch2O35595 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ptch2O35595 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ptch2O35595 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.16■□□□□ 0.66
Ptch2O35595 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.16■□□□□ 0.66
Ptch2O35595 Gm10812-201ENSMUST00000099864 546 ntBASIC19.16■□□□□ 0.66
Ptch2O35595 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ptch2O35595 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ptch2O35595 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ptch2O35595 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ptch2O35595 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ptch2O35595 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ptch2O35595 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ptch2O35595 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ptch2O35595 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Ptch2O35595 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ptch2O35595 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms