Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ercc2O08811 AV356131-201ENSMUST00000206201 750 ntBASIC19.2■□□□□ 0.66
Ercc2O08811 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
Ercc2O08811 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ercc2O08811 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ercc2O08811 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ercc2O08811 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ercc2O08811 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc2O08811 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.18■□□□□ 0.66
Ercc2O08811 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.18■□□□□ 0.66
Ercc2O08811 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ercc2O08811 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc2O08811 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc2O08811 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc2O08811 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc2O08811 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc2O08811 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Ercc2O08811 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ercc2O08811 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ercc2O08811 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Gm10849-201ENSMUST00000100397 618 ntBASIC19.17■□□□□ 0.66
Ercc2O08811 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.17■□□□□ 0.66
Ercc2O08811 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Gm7514-201ENSMUST00000209475 934 ntBASIC19.17■□□□□ 0.66
Ercc2O08811 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ercc2O08811 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.16■□□□□ 0.66
Ercc2O08811 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc2O08811 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc2O08811 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.16■□□□□ 0.66
Ercc2O08811 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ercc2O08811 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc2O08811 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.16■□□□□ 0.66
Ercc2O08811 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc2O08811 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ercc2O08811 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ercc2O08811 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.16■□□□□ 0.66
Ercc2O08811 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.16■□□□□ 0.66
Ercc2O08811 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.15■□□□□ 0.66
Ercc2O08811 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ercc2O08811 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ercc2O08811 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ercc2O08811 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.15■□□□□ 0.66
Ercc2O08811 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.15■□□□□ 0.66
Ercc2O08811 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.15■□□□□ 0.66
Ercc2O08811 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ercc2O08811 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ercc2O08811 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.14■□□□□ 0.66
Ercc2O08811 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ercc2O08811 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ercc2O08811 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ercc2O08811 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc2O08811 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Ercc2O08811 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.14■□□□□ 0.65
Ercc2O08811 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc2O08811 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.14■□□□□ 0.65
Ercc2O08811 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ercc2O08811 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.14■□□□□ 0.65
Ercc2O08811 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms