Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Polr2jO08740 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.96■□□□□ 0.47
Polr2jO08740 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.96■□□□□ 0.47
Polr2jO08740 Gm43137-201ENSMUST00000198052 594 ntBASIC17.96■□□□□ 0.47
Polr2jO08740 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Polr2jO08740 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Polr2jO08740 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Polr2jO08740 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Polr2jO08740 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Polr2jO08740 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.95■□□□□ 0.46
Polr2jO08740 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.95■□□□□ 0.46
Polr2jO08740 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Polr2jO08740 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Polr2jO08740 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Polr2jO08740 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Polr2jO08740 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Polr2jO08740 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Polr2jO08740 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Polr2jO08740 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.94■□□□□ 0.46
Polr2jO08740 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Polr2jO08740 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.94■□□□□ 0.46
Polr2jO08740 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Polr2jO08740 Gm9847-201ENSMUST00000052528 599 ntBASIC17.94■□□□□ 0.46
Polr2jO08740 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Polr2jO08740 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Polr2jO08740 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Polr2jO08740 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Polr2jO08740 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Polr2jO08740 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Polr2jO08740 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Polr2jO08740 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.93■□□□□ 0.46
Polr2jO08740 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Polr2jO08740 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Polr2jO08740 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Polr2jO08740 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Polr2jO08740 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Polr2jO08740 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Polr2jO08740 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Gm12251-201ENSMUST00000117893 792 ntBASIC17.92■□□□□ 0.46
Polr2jO08740 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.92■□□□□ 0.46
Polr2jO08740 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Polr2jO08740 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.92■□□□□ 0.46
Polr2jO08740 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Polr2jO08740 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.91■□□□□ 0.46
Polr2jO08740 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.91■□□□□ 0.46
Polr2jO08740 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.91■□□□□ 0.46
Polr2jO08740 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2jO08740 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.9■□□□□ 0.46
Polr2jO08740 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Polr2jO08740 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2jO08740 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2jO08740 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2jO08740 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2jO08740 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.9■□□□□ 0.46
Polr2jO08740 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2jO08740 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2jO08740 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Polr2jO08740 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.9■□□□□ 0.46
Polr2jO08740 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2jO08740 Gm7860-201ENSMUST00000121190 879 ntBASIC17.9■□□□□ 0.46
Polr2jO08740 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms