Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sgo2bJ3QMK1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sgo2bJ3QMK1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sgo2bJ3QMK1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sgo2bJ3QMK1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Sgo2bJ3QMK1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sgo2bJ3QMK1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.71■□□□□ 0.58
Sgo2bJ3QMK1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sgo2bJ3QMK1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
Sgo2bJ3QMK1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sgo2bJ3QMK1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sgo2bJ3QMK1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sgo2bJ3QMK1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sgo2bJ3QMK1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sgo2bJ3QMK1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sgo2bJ3QMK1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sgo2bJ3QMK1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sgo2bJ3QMK1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.63■□□□□ 0.57
Sgo2bJ3QMK1 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.63■□□□□ 0.57
Sgo2bJ3QMK1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sgo2bJ3QMK1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sgo2bJ3QMK1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sgo2bJ3QMK1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms