Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.87■■□□□ 1.41
ScaperF8VQ70 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ScaperF8VQ70 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ScaperF8VQ70 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
ScaperF8VQ70 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.86■■□□□ 1.41
ScaperF8VQ70 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
ScaperF8VQ70 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ScaperF8VQ70 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ScaperF8VQ70 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ScaperF8VQ70 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ScaperF8VQ70 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ScaperF8VQ70 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ScaperF8VQ70 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.84■■□□□ 1.41
ScaperF8VQ70 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ScaperF8VQ70 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
ScaperF8VQ70 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ScaperF8VQ70 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.83■■□□□ 1.41
ScaperF8VQ70 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ScaperF8VQ70 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ScaperF8VQ70 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
ScaperF8VQ70 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.82■■□□□ 1.4
ScaperF8VQ70 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ScaperF8VQ70 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ScaperF8VQ70 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.82■■□□□ 1.4
ScaperF8VQ70 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ScaperF8VQ70 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.82■■□□□ 1.4
ScaperF8VQ70 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ScaperF8VQ70 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ScaperF8VQ70 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.81■■□□□ 1.4
ScaperF8VQ70 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.81■■□□□ 1.4
ScaperF8VQ70 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC23.81■■□□□ 1.4
ScaperF8VQ70 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ScaperF8VQ70 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ScaperF8VQ70 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ScaperF8VQ70 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
ScaperF8VQ70 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ScaperF8VQ70 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ScaperF8VQ70 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.79■■□□□ 1.4
ScaperF8VQ70 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ScaperF8VQ70 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ScaperF8VQ70 AC124603.1-201ENSMUST00000223843 308 ntBASIC23.78■■□□□ 1.4
ScaperF8VQ70 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ScaperF8VQ70 Gm2559-201ENSMUST00000201323 363 ntBASIC23.78■■□□□ 1.4
ScaperF8VQ70 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Gm15565-201ENSMUST00000118890 427 ntBASIC23.77■■□□□ 1.4
ScaperF8VQ70 Gm11643-201ENSMUST00000119578 864 ntBASIC23.77■■□□□ 1.4
ScaperF8VQ70 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.77■■□□□ 1.4
ScaperF8VQ70 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ScaperF8VQ70 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms