Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.96■□□□□ 0.47
Colca2F8VPY8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Colca2F8VPY8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Colca2F8VPY8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Colca2F8VPY8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.96■□□□□ 0.47
Colca2F8VPY8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Colca2F8VPY8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Colca2F8VPY8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.96■□□□□ 0.46
Colca2F8VPY8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Colca2F8VPY8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Colca2F8VPY8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.94■□□□□ 0.46
Colca2F8VPY8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Colca2F8VPY8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Colca2F8VPY8 Gm13559-201ENSMUST00000120476 863 ntBASIC17.94■□□□□ 0.46
Colca2F8VPY8 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.94■□□□□ 0.46
Colca2F8VPY8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Colca2F8VPY8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Colca2F8VPY8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Colca2F8VPY8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Gm10138-203ENSMUST00000206952 366 ntBASIC17.93■□□□□ 0.46
Colca2F8VPY8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Mtag2-201ENSMUST00000058665 714 ntBASIC17.93■□□□□ 0.46
Colca2F8VPY8 Zfp783-201ENSMUST00000095946 670 ntBASIC17.93■□□□□ 0.46
Colca2F8VPY8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Colca2F8VPY8 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.93■□□□□ 0.46
Colca2F8VPY8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.92■□□□□ 0.46
Colca2F8VPY8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Odf3b-204ENSMUST00000227834 930 ntBASIC17.92■□□□□ 0.46
Colca2F8VPY8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Gm10819-201ENSMUST00000099988 561 ntBASIC17.92■□□□□ 0.46
Colca2F8VPY8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Colca2F8VPY8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Colca2F8VPY8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Colca2F8VPY8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Colca2F8VPY8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.9■□□□□ 0.46
Colca2F8VPY8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.9■□□□□ 0.46
Colca2F8VPY8 Gm11539-201ENSMUST00000119837 557 ntBASIC17.9■□□□□ 0.46
Colca2F8VPY8 Gm13436-201ENSMUST00000120418 567 ntBASIC17.9■□□□□ 0.46
Colca2F8VPY8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.9■□□□□ 0.46
Colca2F8VPY8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.9■□□□□ 0.46
Colca2F8VPY8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.9■□□□□ 0.46
Colca2F8VPY8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Colca2F8VPY8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Colca2F8VPY8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Colca2F8VPY8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Colca2F8VPY8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.89■□□□□ 0.45
Colca2F8VPY8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Colca2F8VPY8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Colca2F8VPY8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms