Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm27704-201ENSMUST00000185094 107 ntBASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Mir5130-201ENSMUST00000175160 84 ntBASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Gm17807-201ENSMUST00000186869 298 ntBASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc188F6WEU2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Gm6443-201ENSMUST00000203599 874 ntBASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc188F6WEU2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc188F6WEU2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Gm22697-201ENSMUST00000175194 63 ntBASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc188F6WEU2 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.08■□□□□ 0.65
Ccdc188F6WEU2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc188F6WEU2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc188F6WEU2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc188F6WEU2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc188F6WEU2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc188F6WEU2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Gm25016-201ENSMUST00000158399 131 ntBASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc188F6WEU2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 AW822252-206ENSMUST00000208904 237 ntBASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc188F6WEU2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc188F6WEU2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc188F6WEU2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc188F6WEU2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc188F6WEU2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc188F6WEU2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc188F6WEU2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms