Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm1E9Q9Q2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
R3hdm1E9Q9Q2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
R3hdm1E9Q9Q2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm1E9Q9Q2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm1E9Q9Q2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm1E9Q9Q2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Gm15565-201ENSMUST00000118890 427 ntBASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm1E9Q9Q2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm1E9Q9Q2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
R3hdm1E9Q9Q2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
R3hdm1E9Q9Q2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
R3hdm1E9Q9Q2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm1E9Q9Q2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm1E9Q9Q2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm1E9Q9Q2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.6■□□□□ 0.89
R3hdm1E9Q9Q2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
R3hdm1E9Q9Q2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3hdm1E9Q9Q2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3hdm1E9Q9Q2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
R3hdm1E9Q9Q2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3hdm1E9Q9Q2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm1E9Q9Q2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3hdm1E9Q9Q2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3hdm1E9Q9Q2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3hdm1E9Q9Q2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.58■□□□□ 0.89
R3hdm1E9Q9Q2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
R3hdm1E9Q9Q2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms