Protein–RNA interactions for Protein: E9PW80

Gm3298, Predicted gene 3298, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3298E9PW80 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3298E9PW80 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3298E9PW80 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3298E9PW80 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3298E9PW80 Gm12441-201ENSMUST00000121806 588 ntBASIC18.42■□□□□ 0.54
Gm3298E9PW80 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3298E9PW80 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3298E9PW80 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.42■□□□□ 0.54
Gm3298E9PW80 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm3298E9PW80 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Gm3298E9PW80 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Gm10653-202ENSMUST00000139570 835 ntBASIC18.41■□□□□ 0.54
Gm3298E9PW80 Mir5133-201ENSMUST00000174955 77 ntBASIC18.41■□□□□ 0.54
Gm3298E9PW80 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.41■□□□□ 0.54
Gm3298E9PW80 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Rarb-207ENSMUST00000225921 2756 ntBASIC18.41■□□□□ 0.54
Gm3298E9PW80 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm3298E9PW80 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm3298E9PW80 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm3298E9PW80 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm3298E9PW80 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3298E9PW80 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.39■□□□□ 0.53
Gm3298E9PW80 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Gm3298E9PW80 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.39■□□□□ 0.53
Gm3298E9PW80 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm3298E9PW80 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.37■□□□□ 0.53
Gm3298E9PW80 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm3298E9PW80 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Gm3298E9PW80 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.36■□□□□ 0.53
Gm3298E9PW80 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm3298E9PW80 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3298E9PW80 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3298E9PW80 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3298E9PW80 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3298E9PW80 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Gm3298E9PW80 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3298E9PW80 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3298E9PW80 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms