Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dchs1E9PVD3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Gm6659-201ENSMUST00000174752 547 ntBASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dchs1E9PVD3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Gm7367-201ENSMUST00000057611 492 ntBASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dchs1E9PVD3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dchs1E9PVD3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Gm15378-201ENSMUST00000121894 207 ntBASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dchs1E9PVD3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dchs1E9PVD3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dchs1E9PVD3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Dchs1E9PVD3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Dchs1E9PVD3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dchs1E9PVD3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms