Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm16042-201ENSMUST00000204813 1247 ntBASIC26.66■■□□□ 1.86
Hfm1D3Z4R1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Hfm1D3Z4R1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Hfm1D3Z4R1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Hfm1D3Z4R1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Hfm1D3Z4R1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Hfm1D3Z4R1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Hfm1D3Z4R1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Gm30025-201ENSMUST00000218555 728 ntBASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hfm1D3Z4R1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Hfm1D3Z4R1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Hfm1D3Z4R1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Hfm1D3Z4R1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Hfm1D3Z4R1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Hfm1D3Z4R1 Gm13559-201ENSMUST00000120476 863 ntBASIC26.64■■□□□ 1.85
Hfm1D3Z4R1 AC107452.1-201ENSMUST00000227963 481 ntBASIC26.64■■□□□ 1.85
Hfm1D3Z4R1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC26.63■■□□□ 1.85
Hfm1D3Z4R1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Hfm1D3Z4R1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Hfm1D3Z4R1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC26.63■■□□□ 1.85
Hfm1D3Z4R1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC26.63■■□□□ 1.85
Hfm1D3Z4R1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Hfm1D3Z4R1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC26.63■■□□□ 1.85
Hfm1D3Z4R1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 Gm43183-201ENSMUST00000200632 547 ntBASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hfm1D3Z4R1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Hfm1D3Z4R1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Hfm1D3Z4R1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Hfm1D3Z4R1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Hfm1D3Z4R1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Hfm1D3Z4R1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Gm5540-201ENSMUST00000131852 1848 ntBASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Hfm1D3Z4R1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Hfm1D3Z4R1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Hfm1D3Z4R1 Mtag2-201ENSMUST00000058665 714 ntBASIC26.59■■□□□ 1.85
Hfm1D3Z4R1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Hfm1D3Z4R1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Hfm1D3Z4R1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Hfm1D3Z4R1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Hfm1D3Z4R1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC26.58■■□□□ 1.85
Hfm1D3Z4R1 Gm11539-201ENSMUST00000119837 557 ntBASIC26.58■■□□□ 1.85
Hfm1D3Z4R1 Gm13436-201ENSMUST00000120418 567 ntBASIC26.58■■□□□ 1.85
Hfm1D3Z4R1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Hfm1D3Z4R1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Hfm1D3Z4R1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Hfm1D3Z4R1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Hfm1D3Z4R1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Odf3b-204ENSMUST00000227834 930 ntBASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Zfp783-201ENSMUST00000095946 670 ntBASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Hfm1D3Z4R1 Gm7889-201ENSMUST00000185591 958 ntBASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Gm21362-201ENSMUST00000194272 928 ntBASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Gm10459-201ENSMUST00000202708 1155 ntBASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Gm18025-201ENSMUST00000221733 862 ntBASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Gm3375-201ENSMUST00000203929 796 ntBASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Hfm1D3Z4R1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Hfm1D3Z4R1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Hfm1D3Z4R1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Hfm1D3Z4R1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Hfm1D3Z4R1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC26.55■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms