Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Shank1D3YZU1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shank1D3YZU1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shank1D3YZU1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Shank1D3YZU1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.76■□□□□ 0.27
Shank1D3YZU1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.76■□□□□ 0.27
Shank1D3YZU1 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.76■□□□□ 0.27
Shank1D3YZU1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shank1D3YZU1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.76■□□□□ 0.27
Shank1D3YZU1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.75■□□□□ 0.27
Shank1D3YZU1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.75■□□□□ 0.27
Shank1D3YZU1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shank1D3YZU1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.74■□□□□ 0.27
Shank1D3YZU1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Shank1D3YZU1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.74■□□□□ 0.27
Shank1D3YZU1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Shank1D3YZU1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank1D3YZU1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shank1D3YZU1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shank1D3YZU1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms