Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Gm27801-201ENSMUST00000184174 223 ntBASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Gm6139-201ENSMUST00000079261 882 ntBASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Gm26833-201ENSMUST00000180899 440 ntBASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h2acC0HKE2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hist1h2acC0HKE2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.1■□□□□ 0.33
Hist1h2acC0HKE2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h2acC0HKE2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h2acC0HKE2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h2acC0HKE2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h2acC0HKE2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h2acC0HKE2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h2acC0HKE2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms