Protein–RNA interactions for Protein: B3F5L4

5830411N06Rik, RIKEN cDNA 5830411N06 gene, mousemouse

Predictions only

Length 1,112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830411N06RikB3F5L4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.29■□□□□ 0.68
5830411N06RikB3F5L4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
5830411N06RikB3F5L4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
5830411N06RikB3F5L4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
5830411N06RikB3F5L4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
5830411N06RikB3F5L4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Gm12441-201ENSMUST00000121806 588 ntBASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
5830411N06RikB3F5L4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
5830411N06RikB3F5L4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.27■□□□□ 0.67
5830411N06RikB3F5L4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
5830411N06RikB3F5L4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Gm5408-201ENSMUST00000197998 747 ntBASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Rab3c-203ENSMUST00000224180 967 ntBASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
5830411N06RikB3F5L4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
5830411N06RikB3F5L4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
5830411N06RikB3F5L4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
5830411N06RikB3F5L4 BC021767-201ENSMUST00000126387 1716 ntBASIC19.22■□□□□ 0.67
5830411N06RikB3F5L4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
5830411N06RikB3F5L4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms