Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.21■□□□□ 0.03
Gm12887B1AVM1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm12887B1AVM1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm12887B1AVM1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm12887B1AVM1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm12887B1AVM1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm12887B1AVM1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm12887B1AVM1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm12887B1AVM1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms