Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a5A6H584 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Col6a5A6H584 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a5A6H584 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.27□□□□□ -0.13
Col6a5A6H584 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.27□□□□□ -0.13
Col6a5A6H584 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 Gm42545-201ENSMUST00000202755 922 ntBASIC14.27□□□□□ -0.13
Col6a5A6H584 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a5A6H584 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col6a5A6H584 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a5A6H584 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a5A6H584 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.26□□□□□ -0.13
Col6a5A6H584 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a5A6H584 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col6a5A6H584 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.25□□□□□ -0.13
Col6a5A6H584 Gm22697-201ENSMUST00000175194 63 ntBASIC14.25□□□□□ -0.13
Col6a5A6H584 Gm18669-201ENSMUST00000216049 778 ntBASIC14.25□□□□□ -0.13
Col6a5A6H584 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 AA386476-201ENSMUST00000098781 1665 ntBASIC14.25□□□□□ -0.13
Col6a5A6H584 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.25□□□□□ -0.13
Col6a5A6H584 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a5A6H584 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col6a5A6H584 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Col6a5A6H584 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Flg-201ENSMUST00000050758 1488 ntBASIC14.24□□□□□ -0.13
Col6a5A6H584 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a5A6H584 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a5A6H584 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Col6a5A6H584 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.24□□□□□ -0.13
Col6a5A6H584 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a5A6H584 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a5A6H584 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.23□□□□□ -0.13
Col6a5A6H584 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col6a5A6H584 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a5A6H584 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a5A6H584 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a5A6H584 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.23□□□□□ -0.13
Col6a5A6H584 Gm27704-201ENSMUST00000185094 107 ntBASIC14.23□□□□□ -0.13
Col6a5A6H584 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a5A6H584 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a5A6H584 Gm15375-201ENSMUST00000119510 849 ntBASIC14.22□□□□□ -0.13
Col6a5A6H584 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.22□□□□□ -0.13
Col6a5A6H584 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a5A6H584 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a5A6H584 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a5A6H584 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col6a5A6H584 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a5A6H584 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a5A6H584 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a5A6H584 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.14
Col6a5A6H584 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms