Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.46■□□□□ 0.87
Ttc38A3KMP2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Gm13146-201ENSMUST00000118508 780 ntBASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc38A3KMP2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc38A3KMP2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc38A3KMP2 Gm13234-201ENSMUST00000120010 747 ntBASIC20.43■□□□□ 0.86
Ttc38A3KMP2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.43■□□□□ 0.86
Ttc38A3KMP2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc38A3KMP2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc38A3KMP2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc38A3KMP2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc38A3KMP2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc38A3KMP2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.4■□□□□ 0.86
Ttc38A3KMP2 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.4■□□□□ 0.86
Ttc38A3KMP2 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc38A3KMP2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Ttc38A3KMP2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc38A3KMP2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc38A3KMP2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.39■□□□□ 0.85
Ttc38A3KMP2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc38A3KMP2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc38A3KMP2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ttc38A3KMP2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc38A3KMP2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Gm13534-201ENSMUST00000121169 513 ntBASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ttc38A3KMP2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms