Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav12d-1A0N8R0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav12d-1A0N8R0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.06■□□□□ 0
Trav12d-1A0N8R0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav12d-1A0N8R0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12d-1A0N8R0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12d-1A0N8R0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12d-1A0N8R0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Spcs1-204ENSMUST00000226782 949 ntBASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12d-1A0N8R0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Rps24-207ENSMUST00000224568 714 ntBASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12d-1A0N8R0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Gm14117-201ENSMUST00000122417 843 ntBASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav12d-1A0N8R0 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms