Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm3880A0A1B0GSB3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm3880A0A1B0GSB3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Gm17082-201ENSMUST00000166043 1091 ntBASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm3880A0A1B0GSB3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Gm6802-201ENSMUST00000167843 1983 ntBASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm3880A0A1B0GSB3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms