Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv17A0A140T8P8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trbv17A0A140T8P8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv17A0A140T8P8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.33□□□□□ -0.11
Trbv17A0A140T8P8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv17A0A140T8P8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv17A0A140T8P8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv17A0A140T8P8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv17A0A140T8P8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv17A0A140T8P8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms