Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7-1A0A0G2JEV5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Spcs1-204ENSMUST00000226782 949 ntBASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7-1A0A0G2JEV5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7-1A0A0G2JEV5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-1A0A0G2JEV5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-1A0A0G2JEV5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-1A0A0G2JEV5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.37□□□□□ -0.11
Trav7-1A0A0G2JEV5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-1A0A0G2JEV5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-1A0A0G2JEV5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms