Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv30A0A0B4J1P1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv30A0A0B4J1P1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv30A0A0B4J1P1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv30A0A0B4J1P1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trbv30A0A0B4J1P1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv30A0A0B4J1P1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv30A0A0B4J1P1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Trbv30A0A0B4J1P1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv30A0A0B4J1P1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm10033-202ENSMUST00000211874 928 ntBASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms