Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gm13836-201ENSMUST00000121159 501 ntBASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Flg-201ENSMUST00000050758 1488 ntBASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm11927-201ENSMUST00000118472 759 ntBASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.07■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm37055-201ENSMUST00000191866 133 ntBASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv16-104A0A0B4J1I1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv16-104A0A0B4J1I1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv16-104A0A0B4J1I1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms