Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Serp2-204ENSMUST00000228055 705 ntBASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv20A0A0B4J1H5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv20A0A0B4J1H5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv20A0A0B4J1H5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv20A0A0B4J1H5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv20A0A0B4J1H5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv20A0A0B4J1H5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.77■□□□□ 0.27
Trbv20A0A0B4J1H5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv20A0A0B4J1H5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trbv20A0A0B4J1H5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Trbv20A0A0B4J1H5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Trbv20A0A0B4J1H5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv20A0A0B4J1H5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trbv20A0A0B4J1H5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Fst-202ENSMUST00000223640 2612 ntBASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms