Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Cap2-205ENSMUST00000225824 1634 ntBASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv12-2A0A0B4J1H1 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.77□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv12-2A0A0B4J1H1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv12-2A0A0B4J1H1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.76□□□□□ -0.05
Trbv12-2A0A0B4J1H1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms