Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Nespas-201ENSMUST00000143738 1083 ntBASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trbv12-1A0A0B4J1H0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv12-1A0A0B4J1H0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv12-1A0A0B4J1H0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gm7291-201ENSMUST00000199147 382 ntBASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv12-1A0A0B4J1H0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms