Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv2A0A0B4J1G8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.61■□□□□ 0.25
Trbv2A0A0B4J1G8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbv2A0A0B4J1G8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv2A0A0B4J1G8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv2A0A0B4J1G8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv2A0A0B4J1G8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv2A0A0B4J1G8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trbv2A0A0B4J1G8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv2A0A0B4J1G8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv2A0A0B4J1G8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv2A0A0B4J1G8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Gm12922-201ENSMUST00000120626 809 ntBASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Gm7860-201ENSMUST00000121190 879 ntBASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Spcs1-204ENSMUST00000226782 949 ntBASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv2A0A0B4J1G8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv2A0A0B4J1G8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trbv2A0A0B4J1G8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms