Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-42A0A0A6YY38 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-42A0A0A6YY38 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Dio3-201ENSMUST00000097228 1449 ntBASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gm10812-201ENSMUST00000099864 546 ntBASIC17.34■□□□□ 0.37
Ighv1-42A0A0A6YY38 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-42A0A0A6YY38 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ighv1-42A0A0A6YY38 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ighv1-42A0A0A6YY38 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.33■□□□□ 0.37
Ighv1-42A0A0A6YY38 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-42A0A0A6YY38 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-42A0A0A6YY38 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-42A0A0A6YY38 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms