Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm28778A0A087WSK7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Nespas-201ENSMUST00000143738 1083 ntBASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Gm27405-201ENSMUST00000184201 112 ntBASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm28778A0A087WSK7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28778A0A087WSK7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28778A0A087WSK7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28778A0A087WSK7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm28778A0A087WSK7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm28778A0A087WSK7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28778A0A087WSK7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.18■□□□□ 0.02
Gm28778A0A087WSK7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Gm7291-201ENSMUST00000199147 382 ntBASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28778A0A087WSK7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm28778A0A087WSK7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms