Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Grk6-206ENSMUST00000224995 2971 ntBASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-4-dv7A0A075B6C2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms