Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6n-6A0A075B6B2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-6A0A075B6B2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6n-6A0A075B6B2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6n-6A0A075B6B2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.9□□□□□ -0.19
Trav6n-6A0A075B6B2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-6A0A075B6B2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-6A0A075B6B2 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms