Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-3A0A075B6A4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-3A0A075B6A4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-3A0A075B6A4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-3A0A075B6A4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-3A0A075B6A4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-3A0A075B6A4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-3A0A075B6A4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav12d-3A0A075B6A4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-3A0A075B6A4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-3A0A075B6A4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-3A0A075B6A4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-3A0A075B6A4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav12d-3A0A075B6A4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12d-3A0A075B6A4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Gm11687-201ENSMUST00000118911 886 ntBASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.97□□□□□ -0.17
Trav12d-3A0A075B6A4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms