Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trav6-7-dv9A0A075B639 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-7-dv9A0A075B639 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav6-7-dv9A0A075B639 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-7-dv9A0A075B639 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-7-dv9A0A075B639 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav6-7-dv9A0A075B639 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-7-dv9A0A075B639 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav6-7-dv9A0A075B639 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms