Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.85■□□□□ 0.61
Trbv4A0A075B5I2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Gm13146-201ENSMUST00000118508 780 ntBASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv4A0A075B5I2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv4A0A075B5I2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv4A0A075B5I2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv4A0A075B5I2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv4A0A075B5I2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv4A0A075B5I2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv4A0A075B5I2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv4A0A075B5I2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.83■□□□□ 0.6
Trbv4A0A075B5I2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv4A0A075B5I2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.83■□□□□ 0.6
Trbv4A0A075B5I2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv4A0A075B5I2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv4A0A075B5I2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv4A0A075B5I2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv4A0A075B5I2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv4A0A075B5I2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv4A0A075B5I2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 Gm13234-201ENSMUST00000120010 747 ntBASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv4A0A075B5I2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv4A0A075B5I2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms