Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm44247-201ENSMUST00000203875 277 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm2694-209ENSMUST00000210935 1125 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 AC113107.1-201ENSMUST00000218358 396 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 AC120406.1-201ENSMUST00000220362 482 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 AC133498.1-204ENSMUST00000220830 743 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 CR974487.1-201ENSMUST00000220984 413 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm7614-201ENSMUST00000222235 328 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm23973-201ENSMUST00000083320 321 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 C8a-201ENSMUST00000048947 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Rps6ka1-206ENSMUST00000168974 2982 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm37354-201ENSMUST00000193333 2384 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 D430036J16Rik-202ENSMUST00000181447 1732 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm8366-201ENSMUST00000118751 1769 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm8346-201ENSMUST00000178968 1769 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm6524-201ENSMUST00000209673 1443 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm8603-201ENSMUST00000115649 1515 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm43800-201ENSMUST00000201868 2731 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Ppp2r2b-201ENSMUST00000025377 2031 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Cstl1-203ENSMUST00000109955 668 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm9126-201ENSMUST00000117072 416 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm14153-201ENSMUST00000119923 1139 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm13532-201ENSMUST00000120373 240 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm16471-201ENSMUST00000121940 618 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm16359-201ENSMUST00000124511 289 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm16357-201ENSMUST00000144091 474 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm7281-201ENSMUST00000160010 543 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Sorbs1-204ENSMUST00000165469 2145 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm25736-201ENSMUST00000175165 101 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm18513-201ENSMUST00000177313 560 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Lbhd1-201ENSMUST00000177826 534 ntTSL 2 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm28875-201ENSMUST00000185486 1189 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm29336-201ENSMUST00000186042 573 ntTSL 2 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Ly6c1-205ENSMUST00000187347 522 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm18299-201ENSMUST00000192026 636 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Ighv1-8-201ENSMUST00000192236 293 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm43551-201ENSMUST00000197221 440 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm44253-201ENSMUST00000203387 628 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm43903-201ENSMUST00000205126 617 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm32858-201ENSMUST00000205246 585 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm36208-201ENSMUST00000220013 429 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 AC134860.4-201ENSMUST00000223592 978 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 AC163638.1-201ENSMUST00000224818 392 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 CT030238.2-201ENSMUST00000227382 1278 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 AC154239.2-201ENSMUST00000227859 233 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 CT025535.1-202ENSMUST00000228291 241 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm10689-201ENSMUST00000098864 432 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Sdhaf2-201ENSMUST00000025570 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm37598-201ENSMUST00000194506 1301 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Asph-206ENSMUST00000103004 1762 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms