Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm43790-201ENSMUST00000202694 2013 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm42589-201ENSMUST00000199097 1751 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm24433-201ENSMUST00000104080 133 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm14276-201ENSMUST00000117941 720 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm11212-201ENSMUST00000118337 618 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm13623-201ENSMUST00000118359 625 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm14623-201ENSMUST00000121398 603 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm16310-201ENSMUST00000124376 960 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm14710-201ENSMUST00000146082 1066 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm26000-201ENSMUST00000157991 107 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm22616-201ENSMUST00000179783 100 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm15645-202ENSMUST00000183393 1299 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm37942-201ENSMUST00000191875 628 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm18747-201ENSMUST00000198129 648 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm45481-201ENSMUST00000209717 877 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm17850-201ENSMUST00000210023 1154 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm45912-201ENSMUST00000210646 543 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Tex43-201ENSMUST00000035640 565 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Tctex1d2-202ENSMUST00000080316 720 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Olfr979-201ENSMUST00000080835 1045 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm26397-201ENSMUST00000083703 134 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm22864-201ENSMUST00000083950 130 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm14735-201ENSMUST00000121772 3088 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Fam45a-201ENSMUST00000025957 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm44005-201ENSMUST00000203186 3173 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm18697-201ENSMUST00000191179 2126 ntBASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Agbl4-201ENSMUST00000080744 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 C8b-201ENSMUST00000031663 2239 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Pter-201ENSMUST00000028063 1652 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm37957-201ENSMUST00000192182 2303 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm10286-201ENSMUST00000093603 5077 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm42615-201ENSMUST00000197704 1820 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Rabep1-204ENSMUST00000108533 2791 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Pde4b-202ENSMUST00000097949 2465 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm5315-201ENSMUST00000204430 1897 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm5997-201ENSMUST00000208154 1864 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Sult1a1-203ENSMUST00000106373 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm14984-201ENSMUST00000120343 1263 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Vmn1r-ps113-201ENSMUST00000121318 1106 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm14856-201ENSMUST00000121548 613 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm13052-201ENSMUST00000125582 769 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Snhg7os-201ENSMUST00000126798 546 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm11342-201ENSMUST00000147704 621 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm4775-201ENSMUST00000169588 402 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Zfp87-203ENSMUST00000181573 382 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm26964-201ENSMUST00000182516 832 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm27941-201ENSMUST00000183418 142 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Mir8110-201ENSMUST00000183771 97 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Trav4-1-201ENSMUST00000199078 330 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm43846-201ENSMUST00000200502 932 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm43090-201ENSMUST00000202459 314 ntBASIC8.2□□□□□ -1.1
Trim39Q9ESN2 Gm18861-201ENSMUST00000202509 1186 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms