Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Pus10-202ENSMUST00000058163 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm15470-201ENSMUST00000119135 1371 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Morc3-202ENSMUST00000201097 2918 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Cd200-201ENSMUST00000023341 2085 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm37315-201ENSMUST00000194347 3479 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm37443-201ENSMUST00000193458 2827 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gbp8-202ENSMUST00000112718 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Ly6c2-201ENSMUST00000100542 822 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Meig1-205ENSMUST00000115084 643 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm12287-201ENSMUST00000119770 707 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm7158-201ENSMUST00000120079 903 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm15194-201ENSMUST00000120453 434 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm12444-201ENSMUST00000121512 877 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm17163-201ENSMUST00000152043 432 ntTSL 2 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm6483-201ENSMUST00000155660 862 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm8254-201ENSMUST00000182326 972 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm27221-201ENSMUST00000183485 961 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm27176-201ENSMUST00000183642 961 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm8982-201ENSMUST00000184198 1295 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm7761-201ENSMUST00000190510 921 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm37433-201ENSMUST00000192695 678 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm37441-201ENSMUST00000194430 678 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm9729-201ENSMUST00000196364 265 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm43139-201ENSMUST00000199914 284 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm45247-201ENSMUST00000210757 309 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 AC122901.2-201ENSMUST00000216926 285 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 G6pc2-201ENSMUST00000005364 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 AC134860.3-201ENSMUST00000223564 1300 ntBASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Mavs-201ENSMUST00000041362 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Erg-204ENSMUST00000118113 3062 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Cntn4-205ENSMUST00000113261 2904 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim39Q9ESN2 Pms2-202ENSMUST00000110709 1386 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gemin8-204ENSMUST00000130880 1389 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28905-202ENSMUST00000219328 1377 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Lilrb4a-204ENSMUST00000078778 1381 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Olfr641-202ENSMUST00000213214 2379 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Pabpc6-201ENSMUST00000057190 3208 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm26562-201ENSMUST00000181113 2010 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Pus3-201ENSMUST00000034615 2019 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Zfp454-206ENSMUST00000163301 2090 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm33630-201ENSMUST00000223038 2071 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm11232-201ENSMUST00000084489 1680 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Rnf122-201ENSMUST00000046941 3582 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Mir181d-201ENSMUST00000102383 72 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Trav9-1-201ENSMUST00000103581 398 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm25763-201ENSMUST00000104099 129 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms