Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm26424-201ENSMUST00000122530 104 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm27033-201ENSMUST00000183226 544 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Cep70-209ENSMUST00000191335 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm44341-201ENSMUST00000196168 138 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC125099.1-201ENSMUST00000197780 138 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC125099.2-201ENSMUST00000198228 138 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 1700069P05Rik-201ENSMUST00000204240 785 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm7434-201ENSMUST00000208558 408 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm45551-201ENSMUST00000211459 928 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC153562.1-201ENSMUST00000215390 394 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 CT009765.2-201ENSMUST00000221331 392 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC153153.1-201ENSMUST00000225803 793 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC164315.1-202ENSMUST00000226723 657 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC154843.1-201ENSMUST00000226897 1138 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC102815.2-201ENSMUST00000227837 541 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm5624-204ENSMUST00000227882 842 ntAPPRIS P5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 AC098742.1-201ENSMUST00000227945 373 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm16477-201ENSMUST00000085365 801 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm10683-201ENSMUST00000211556 1374 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Gm7389-201ENSMUST00000181162 2884 ntBASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim39Q9ESN2 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Fmo6-201ENSMUST00000178465 1691 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm28187-201ENSMUST00000186885 2134 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Mtmr6-201ENSMUST00000022563 3813 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Scg2-202ENSMUST00000185234 2317 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm13041-201ENSMUST00000122323 1524 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Chrdl2-201ENSMUST00000032977 1520 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Sytl3-205ENSMUST00000160483 1720 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm37537-201ENSMUST00000192154 1738 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm37266-201ENSMUST00000193802 2287 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm12619-201ENSMUST00000117369 385 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm14470-201ENSMUST00000119085 466 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm13653-201ENSMUST00000122260 483 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm15878-201ENSMUST00000127561 306 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm23916-201ENSMUST00000158484 399 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm16578-201ENSMUST00000160797 784 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm26942-201ENSMUST00000182854 797 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Mir6973a-201ENSMUST00000183646 78 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Mir6965-201ENSMUST00000184733 64 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Slc35a4-205ENSMUST00000185899 312 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm28688-201ENSMUST00000187301 268 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 1700113B19Rik-201ENSMUST00000191817 420 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm37438-201ENSMUST00000192813 393 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm37187-201ENSMUST00000193425 341 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm6064-201ENSMUST00000203999 454 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm34099-201ENSMUST00000211592 704 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim39Q9ESN2 Gm7119-201ENSMUST00000221345 695 ntBASIC8.3□□□□□ -1.08
Trim39Q9ESN2 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms