Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
H2afb2S4R1M3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
H2afb2S4R1M3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb2S4R1M3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb2S4R1M3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb2S4R1M3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H2afb2S4R1M3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Gm9988-201ENSMUST00000069786 435 ntBASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
H2afb2S4R1M3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb2S4R1M3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb2S4R1M3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.79■□□□□ 0.6
H2afb2S4R1M3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb2S4R1M3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.78■□□□□ 0.6
H2afb2S4R1M3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.78■□□□□ 0.6
H2afb2S4R1M3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb2S4R1M3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb2S4R1M3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb2S4R1M3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb2S4R1M3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.78■□□□□ 0.6
H2afb2S4R1M3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb2S4R1M3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2afb2S4R1M3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.77■□□□□ 0.59
H2afb2S4R1M3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
H2afb2S4R1M3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb2S4R1M3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms