Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h3Q9Z0Y9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Rab3c-203ENSMUST00000224180 967 ntBASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h3Q9Z0Y9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.41■□□□□ 0.86
Nr1h3Q9Z0Y9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm37856-201ENSMUST00000191634 999 ntBASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm26524-201ENSMUST00000192339 390 ntBASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h3Q9Z0Y9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.39■□□□□ 0.86
Nr1h3Q9Z0Y9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nr1h3Q9Z0Y9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nr1h3Q9Z0Y9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Nr1h3Q9Z0Y9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Trmt13-210ENSMUST00000198454 880 ntBASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nr1h3Q9Z0Y9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm10812-201ENSMUST00000099864 546 ntBASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nr1h3Q9Z0Y9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1h3Q9Z0Y9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms