Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn9Q9Z0S7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn9Q9Z0S7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn9Q9Z0S7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cldn9Q9Z0S7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn9Q9Z0S7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn9Q9Z0S7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn9Q9Z0S7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn9Q9Z0S7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn9Q9Z0S7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn9Q9Z0S7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Gm38205-201ENSMUST00000192243 258 ntBASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms