Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Gm10653-202ENSMUST00000139570 835 ntBASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcb1Q9Z0H3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcb1Q9Z0H3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcb1Q9Z0H3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcb1Q9Z0H3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.53■□□□□ 0.72
Smarcb1Q9Z0H3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcb1Q9Z0H3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcb1Q9Z0H3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcb1Q9Z0H3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcb1Q9Z0H3 Gm8520-201ENSMUST00000186517 868 ntBASIC19.53■□□□□ 0.72
Smarcb1Q9Z0H3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcb1Q9Z0H3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcb1Q9Z0H3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcb1Q9Z0H3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.51■□□□□ 0.71
Smarcb1Q9Z0H3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smarcb1Q9Z0H3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcb1Q9Z0H3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms