Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ClcnkaQ9WUB7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Gm7860-201ENSMUST00000121190 879 ntBASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ClcnkaQ9WUB7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Gm9988-201ENSMUST00000069786 435 ntBASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ClcnkaQ9WUB7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.23■□□□□ 0.35
ClcnkaQ9WUB7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ClcnkaQ9WUB7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClcnkaQ9WUB7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
ClcnkaQ9WUB7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms