Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CcsQ9WU84 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CcsQ9WU84 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CcsQ9WU84 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.55□□□□□ -0.08
CcsQ9WU84 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CcsQ9WU84 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.54□□□□□ -0.08
CcsQ9WU84 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.54□□□□□ -0.08
CcsQ9WU84 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.54□□□□□ -0.08
CcsQ9WU84 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CcsQ9WU84 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CcsQ9WU84 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CcsQ9WU84 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CcsQ9WU84 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.53□□□□□ -0.08
CcsQ9WU84 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.53□□□□□ -0.08
CcsQ9WU84 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.53□□□□□ -0.08
CcsQ9WU84 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CcsQ9WU84 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CcsQ9WU84 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CcsQ9WU84 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CcsQ9WU84 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.52□□□□□ -0.08
CcsQ9WU84 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.52□□□□□ -0.08
CcsQ9WU84 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CcsQ9WU84 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.52□□□□□ -0.08
CcsQ9WU84 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CcsQ9WU84 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.52□□□□□ -0.09
CcsQ9WU84 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CcsQ9WU84 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.52□□□□□ -0.09
CcsQ9WU84 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CcsQ9WU84 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CcsQ9WU84 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CcsQ9WU84 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CcsQ9WU84 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CcsQ9WU84 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CcsQ9WU84 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CcsQ9WU84 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CcsQ9WU84 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CcsQ9WU84 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CcsQ9WU84 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CcsQ9WU84 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CcsQ9WU84 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CcsQ9WU84 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CcsQ9WU84 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CcsQ9WU84 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.5□□□□□ -0.09
CcsQ9WU84 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms