Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Gm13534-201ENSMUST00000121169 513 ntBASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Gm26524-201ENSMUST00000192339 390 ntBASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col13a1Q9R1N9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Col13a1Q9R1N9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col13a1Q9R1N9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col13a1Q9R1N9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col13a1Q9R1N9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.94■□□□□ 0.14
Col13a1Q9R1N9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Col13a1Q9R1N9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col13a1Q9R1N9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col13a1Q9R1N9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col13a1Q9R1N9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col13a1Q9R1N9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col13a1Q9R1N9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col13a1Q9R1N9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col13a1Q9R1N9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col13a1Q9R1N9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.9■□□□□ 0.14
Col13a1Q9R1N9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col13a1Q9R1N9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col13a1Q9R1N9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col13a1Q9R1N9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms