Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Htra1Q9R118 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Htra1Q9R118 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Htra1Q9R118 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Htra1Q9R118 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.36■□□□□ 0.37
Htra1Q9R118 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Htra1Q9R118 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Htra1Q9R118 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Htra1Q9R118 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.35■□□□□ 0.37
Htra1Q9R118 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Htra1Q9R118 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Htra1Q9R118 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.34■□□□□ 0.37
Htra1Q9R118 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.34■□□□□ 0.37
Htra1Q9R118 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Htra1Q9R118 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Htra1Q9R118 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Htra1Q9R118 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Htra1Q9R118 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Htra1Q9R118 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Htra1Q9R118 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Htra1Q9R118 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Htra1Q9R118 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Htra1Q9R118 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Htra1Q9R118 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Htra1Q9R118 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Htra1Q9R118 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Htra1Q9R118 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Htra1Q9R118 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.33■□□□□ 0.36
Htra1Q9R118 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.32■□□□□ 0.36
Htra1Q9R118 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.32■□□□□ 0.36
Htra1Q9R118 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Htra1Q9R118 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.32■□□□□ 0.36
Htra1Q9R118 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.32■□□□□ 0.36
Htra1Q9R118 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Htra1Q9R118 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Htra1Q9R118 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Htra1Q9R118 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.31■□□□□ 0.36
Htra1Q9R118 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Htra1Q9R118 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Htra1Q9R118 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.31■□□□□ 0.36
Htra1Q9R118 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.31■□□□□ 0.36
Htra1Q9R118 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Htra1Q9R118 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra1Q9R118 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra1Q9R118 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra1Q9R118 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra1Q9R118 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra1Q9R118 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
Htra1Q9R118 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.3■□□□□ 0.36
Htra1Q9R118 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
Htra1Q9R118 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Htra1Q9R118 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra1Q9R118 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra1Q9R118 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra1Q9R118 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.3■□□□□ 0.36
Htra1Q9R118 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms