Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn2Q9R0A1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn2Q9R0A1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clcn2Q9R0A1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Clcn2Q9R0A1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn2Q9R0A1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn2Q9R0A1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn2Q9R0A1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Gm43060-201ENSMUST00000200621 289 ntBASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn2Q9R0A1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Gm40848-201ENSMUST00000221998 324 ntBASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn2Q9R0A1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn2Q9R0A1 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.14■□□□□ 0.66
Clcn2Q9R0A1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms