Protein–RNA interactions for Protein: Q9QZD5

Chml, Rab proteins geranylgeranyltransferase component A 2, mousemouse

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChmlQ9QZD5 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.35■□□□□ 0.53
ChmlQ9QZD5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChmlQ9QZD5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ChmlQ9QZD5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ChmlQ9QZD5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Trmt13-210ENSMUST00000198454 880 ntBASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ChmlQ9QZD5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.33■□□□□ 0.53
ChmlQ9QZD5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ChmlQ9QZD5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ChmlQ9QZD5 Gm6365-201ENSMUST00000054711 744 ntBASIC18.33■□□□□ 0.52
ChmlQ9QZD5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ChmlQ9QZD5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ChmlQ9QZD5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ChmlQ9QZD5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.32■□□□□ 0.52
ChmlQ9QZD5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ChmlQ9QZD5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ChmlQ9QZD5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ChmlQ9QZD5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ChmlQ9QZD5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.28■□□□□ 0.52
ChmlQ9QZD5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ChmlQ9QZD5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms